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Prediction of n-octanol/water partition coefficients and acidity constants (pKa) in the SAMPL7 blind challenge with the IEFPCM-MST model

dc.creatorViayna, Antonio
dc.creatorPinheiro, Silvana De Souza
dc.creatorCurutchet, Carles
dc.creatorLuque del Villar, Francisco Javier
dc.creatorZamora Ramírez, William J.
dc.date.accessioned2025-12-12T21:46:51Z
dc.date.issued2021-07-10
dc.description.abstractWithin the scope of SAMPL7 challenge for predicting physical properties, the Integral Equation Formalism of the Miertus-Scrocco-Tomasi (IEFPCM/MST) continuum solvation model has been used for the blind prediction of n-octanol/water partition coefficients and acidity constants of a set of 22 and 20 sulfonamide-containing compounds, respectively. The log P and pKa were computed using the B3LPYP/6-31G(d) parametrized version of the IEFPCM/MST model. The performance of our method for partition coefficients yielded a root-mean square error of 1.03 (log P units), placing this method among the most accurate theoretical approaches in the comparison with both globally (rank 8th) and physical (rank 2nd) methods. On the other hand, the deviation between predicted and experimental pKa values was 1.32 log units, obtaining the second best-ranked submission. Though this highlights the reliability of the IEFPCM/MST model for predicting the partitioning and the acid dissociation constant of drug-like compounds compound, the results are discussed to identify potential weaknesses and improve the performance of the method.
dc.description.procedenceVicerrectoría de Docencia::Ciencias Básicas::Facultad de Ciencias::Escuela de Química
dc.description.procedenceVicerrectoría de Docencia::Salud::Facultad de Farmacia
dc.identifier.citationhttps://link.springer.com/article/10.1007/s10822-021-00394-6
dc.identifier.doihttps://doi.org/10.1007/s10822-021-00394-6
dc.identifier.issn1573-4951
dc.identifier.urihttps://hdl.handle.net/10669/103407
dc.language.isoeng
dc.rightsacceso restringido
dc.sourceJournal of Computer Aided Molecular Design, 35(1), 803-811
dc.subjectPhysical properties
dc.subjectWater-octanol log P
dc.subjectSolvation free energy
dc.subjectMST model
dc.subjectContinuum solvation models
dc.subjectConformational study
dc.titlePrediction of n-octanol/water partition coefficients and acidity constants (pKa) in the SAMPL7 blind challenge with the IEFPCM-MST model
dc.typeartículo original

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